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OriDB, the DNA replication origin database updated and extended

Siow, Cheuk C.; Nieduszynska, Sian R.; M�ller, Carolin A.; Nieduszynski, Conrad A.

Authors

Cheuk C. Siow

Sian R. Nieduszynska

Carolin A. M�ller

Conrad A. Nieduszynski



Abstract

OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been revamped to improve user accessibility to curated data sets, to greatly increase the number of curated origin mapping studies, and to include the collation of replication origin sites in the fission yeast Schizosaccharomyces pombe. The revised database structure underlies these improvements and will facilitate further expansion in the future. The updated OriDB for S. cerevisiae is available at http://cerevisiae.oridb.org/ and for S. pombe at http://pombe.oridb.org/.

Citation

Siow, C. C., Nieduszynska, S. R., Müller, C. A., & Nieduszynski, C. A. (2012). OriDB, the DNA replication origin database updated and extended. Nucleic Acids Research, 40(D1), Article D682-D686. https://doi.org/10.1093/nar/gkr1091

Journal Article Type Article
Publication Date Jan 1, 2012
Deposit Date Apr 16, 2014
Publicly Available Date Apr 16, 2014
Journal Nucleic Acids Research
Print ISSN 0305-1048
Electronic ISSN 0305-1048
Publisher Oxford University Press
Peer Reviewed Peer Reviewed
Volume 40
Issue D1
Article Number D682-D686
DOI https://doi.org/10.1093/nar/gkr1091
Public URL https://nottingham-repository.worktribe.com/output/1009331
Publisher URL http://nar.oxfordjournals.org/content/40/D1/D682.long#sec-8

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