OriDB, the DNA replication origin database updated and extended

Siow, Cheuk C.; Nieduszynska, Sian R.; M�ller, Carolin A.; Nieduszynski, Conrad A.

Abstract

OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been revamped to improve user accessibility to curated data sets, to greatly increase the number of curated origin mapping studies, and to include the collation of replication origin sites in the fission yeast Schizosaccharomyces pombe. The revised database structure underlies these improvements and will facilitate further expansion in the future. The updated OriDB for S. cerevisiae is available at http://cerevisiae.oridb.org/ and for S. pombe at http://pombe.oridb.org/.

Citation

Siow, C. C., Nieduszynska, S. R., Müller, C. A., & Nieduszynski, C. A. (2012). OriDB, the DNA replication origin database updated and extended. Nucleic Acids Research, 40(D1), Article D682-D686. https://doi.org/10.1093/nar/gkr1091

• Journal Article Type: Article
• Publication Date: Jan 1, 2012
• Deposit Date: Apr 16, 2014
• Publicly Available Date: Apr 16, 2014
• Journal: Nucleic Acids Research
• Print ISSN: 0305-1048
• Electronic ISSN: 1362-4962
• Publisher: Oxford University Press
• Peer Reviewed: Peer Reviewed
• Volume: 40
• Issue: D1
• Article Number: D682-D686
• DOI: https://doi.org/10.1093/nar/gkr1091
• Public URL: https://nottingham-repository.worktribe.com/output/1009331
• Publisher URL: http://nar.oxfordjournals.org/content/40/D1/D682.long#sec-8