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CG7379 and ING1 suppress cancer cell invasion by maintaining cell–cell junction integrity (2021)
Journal Article
Rusu, A. D., Cornhill, Z. E., Coutiño, B. C., Uribe, M. C., Lourdusamy, A., Markus, Z., …Georgiou, M. (2021). CG7379 and ING1 suppress cancer cell invasion by maintaining cell–cell junction integrity. Open Biology, 11(9), Article 210077. https://doi.org/10.1098/rsob.210077

Approximately 90% of cancer-related deaths can be attributed to a tumour's ability to spread. We have identified CG7379, the fly orthologue of human ING1, as a potent invasion suppressor. ING1 is a type II tumour suppressor with well-established role... Read More about CG7379 and ING1 suppress cancer cell invasion by maintaining cell–cell junction integrity.

Assessing land suitability for rainfed paddy rice production in Zambia (2021)
Journal Article
Makungwe, M., Chabala, L. M., Van Dijk, M., Chishala, B. H., & Lark, R. M. (2021). Assessing land suitability for rainfed paddy rice production in Zambia. Geoderma Regional, 27, Article e00438. https://doi.org/10.1016/j.geodrs.2021.e00438

Rice is one of the staple food crops and is a profitable smallholder cash crop in Zambia. It has the potential to contribute significantly to increased incomes and employment among rural producers. However, rice is the only staple crop in the country... Read More about Assessing land suitability for rainfed paddy rice production in Zambia.

The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy (2021)
Journal Article
Burgess, A. J., Durand, M., Retkute, R., Gibbs, J. A., Robson, T. M., & Murchie, E. H. (2021). The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy. Plant, Cell and Environment, 44(11), 3524-3537. https://doi.org/10.1111/pce.14168

Under field conditions, plants are subject to wind-induced movement which creates fluctuations of light intensity and spectral quality reaching the leaves, defined here as windflecks. Within this study, irradiance within two contrasting wheat (Tritic... Read More about The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy.

Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles (2021)
Journal Article
Konečná, V., Bray, S., Vlček, J., Bohutínská, M., Požárová, D., Choudhury, R. R., …Kolář, F. (2021). Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles. Nature Communications, 12(1), Article 4979. https://doi.org/10.1038/s41467-021-25256-5

Relative contributions of pre-existing vs de novo genomic variation to adaptation are poorly understood, especially in polyploid organisms. We assess this in high resolution using autotetraploid Arabidopsis arenosa, which repeatedly adapted to toxic... Read More about Parallel adaptation in autopolyploid Arabidopsis arenosa is dominated by repeated recruitment of shared alleles.

Non-invasive hydrodynamic imaging in plant roots at cellular resolution (2021)
Journal Article
Pascut, F. C., Couvreur, V., Dietrich, D., Leftley, N., Reyt, G., Boursiac, Y., …Webb, K. F. (2021). Non-invasive hydrodynamic imaging in plant roots at cellular resolution. Nature Communications, 12(1), 1-7. https://doi.org/10.1038/s41467-021-24913-z

A key impediment to studying water-related mechanisms in plants is the inability to non-invasively image water fluxes in cells at high temporal and spatial resolution. Here, we report that Raman microspectroscopy, complemented by hydrodynamic modelli... Read More about Non-invasive hydrodynamic imaging in plant roots at cellular resolution.

Target Gene Identification and sgRNA Design for Waterlogging Tolerance in Foxtail Millet via CRISPR-Based Transcriptional Activation (2021)
Journal Article
Nor Akmar Abdullah, S., Abdullah, A., & Mayes, S. (2021). Target Gene Identification and sgRNA Design for Waterlogging Tolerance in Foxtail Millet via CRISPR-Based Transcriptional Activation. Current Chinese Science, 1(5), 523-533. https://doi.org/10.2174/2210298101666210709104258

Background:
CRISPR activation (CRISPRa) uses non-functional Cas9 endonuclease (dCas9) but retains the genome targeting ability through its single guide RNAs (sgRNAs). CRISPRa is widely utilised as a gene activation system exploiting its ability in r... Read More about Target Gene Identification and sgRNA Design for Waterlogging Tolerance in Foxtail Millet via CRISPR-Based Transcriptional Activation.

The effect of soil properties on zinc lability and solubility in soils of Ethiopia - an isotopic dilution study (2021)
Journal Article
Mossa, A. W., Gashu, D., Broadley, M. R., Dunham, S. J., McGrath, S. P., Bailey, E. H., & Young, S. D. (2021). The effect of soil properties on zinc lability and solubility in soils of Ethiopia - an isotopic dilution study. SOIL, 7(1), 255-268. https://doi.org/10.5194/soil-7-255-2021

Zinc (Zn) deficiency is a widespread nutritional problem in human populations, especially in sub-Saharan Africa (SSA). The Zn concentration of crops consumed depends in part on the Zn status of the soil. Improved understanding of factors controlling... Read More about The effect of soil properties on zinc lability and solubility in soils of Ethiopia - an isotopic dilution study.

OsJAZ11 regulates phosphate starvation responses in rice (2021)
Journal Article
Pandey, B. K., Verma, L., Prusty, A., Singh, A. P., Bennett, M. J., Tyagi, A. K., …Mehra, P. (2021). OsJAZ11 regulates phosphate starvation responses in rice. Planta, 254(1), 1-16. https://doi.org/10.1007/s00425-021-03657-6

Main conclusion: OsJAZ11 regulates phosphate homeostasis by suppressing jasmonic acid signaling and biosynthesis in rice roots. Abstract: Jasmonic Acid (JA) is a key plant signaling molecule which negatively regulates growth processes including root... Read More about OsJAZ11 regulates phosphate starvation responses in rice.

Identifying quantitative trait loci for lodging-associated traits in the wheat doubled-haploid population Avalon × Cadenza (2021)
Journal Article
Piñera-Chavez, F. J., Berry, P. M., Foulkes, M. J., Sukumaran, S., & Reynolds, M. P. (2021). Identifying quantitative trait loci for lodging-associated traits in the wheat doubled-haploid population Avalon × Cadenza. Crop Science, 61(4), 2371-2386. https://doi.org/10.1002/csc2.20485

Lodging affects grain quality and grain yield in wheat (Triticum aestivum L.) and is difficult to breed for because its sporadic incidence and laborious protocols to measure lodging traits. Thus, developing molecular markers for these traits can incr... Read More about Identifying quantitative trait loci for lodging-associated traits in the wheat doubled-haploid population Avalon × Cadenza.

Mapping the interaction between eukaryotic initiation factor 4A (eIF4A) and the inhibitor hippuristanol using carbene footprinting and mass spectrometry (2021)
Journal Article
Lloyd, J. R., Hogan, A., Paschalis, V., Bellamy-Carter, J., Bottley, A., Seymour, G. B., Hayes, C. J., & Oldham, N. J. (2021). Mapping the interaction between eukaryotic initiation factor 4A (eIF4A) and the inhibitor hippuristanol using carbene footprinting and mass spectrometry. Proteomics, 21(21-22), Article 2000288. https://doi.org/10.1002/pmic.202000288

Protein-ligand interactions are central to protein activity and cell functionality. Improved knowledge of these relationships greatly benefits our understanding of key biological processes and aids in rational drug design towards the treatment of cli... Read More about Mapping the interaction between eukaryotic initiation factor 4A (eIF4A) and the inhibitor hippuristanol using carbene footprinting and mass spectrometry.

Ten challenges for the future of pedometrics (2021)
Journal Article
Wadoux, A. M., Heuvelink, G. B., Lark, R. M., Lagacherie, P., Bouma, J., Mulder, V. L., …McBratney, A. B. (2021). Ten challenges for the future of pedometrics. Geoderma, 401, Article 115155. https://doi.org/10.1016/j.geoderma.2021.115155

Pedometrics, the application of mathematical and statistical methods to the study of the distribution and genesis of soils, has broadened its scope over the past two decades. The primary focus of pedometricians has traditionally been on spatial and s... Read More about Ten challenges for the future of pedometrics.

A comparison between three legacy soil maps of Zambia at national scale: The spatial patterns of legend units and their relation to soil properties (2021)
Journal Article
Mukumbuta, I., Chabala, L. M., Sichinga, S., Miti, C., & Lark, R. M. (2021). A comparison between three legacy soil maps of Zambia at national scale: The spatial patterns of legend units and their relation to soil properties. Geoderma, 402, Article 115193. https://doi.org/10.1016/j.geoderma.2021.115193

We examined three soil maps of Zambia, two published at scales of 1:1 million – the Exploratory Soil Map of Zambia (ESMZ) and the Vegetation–Soil Map produced by Trapnell and colleagues in 1947 – and one at 1:3 million, the Soil Atlas of Africa (SAA)... Read More about A comparison between three legacy soil maps of Zambia at national scale: The spatial patterns of legend units and their relation to soil properties.

The nutritional quality of cereals varies geospatially in Ethiopia and Malawi (2021)
Journal Article
Gashu, D., Nalivata, P. C., Amede, T., Ander, E. L., Bailey, E. H., Botoman, L., …Broadley, M. R. (2021). The nutritional quality of cereals varies geospatially in Ethiopia and Malawi. Nature, 594, 71-76. https://doi.org/10.1038/s41586-021-03559-3

Micronutrient deficiencies (MNDs) remain widespread among people in sub-Saharan Africa where access to sufficient food from plant and animal sources that is rich in micronutrients (vitamins and minerals) is limited due to socioeconomic and geographic... Read More about The nutritional quality of cereals varies geospatially in Ethiopia and Malawi.

Challenges for FAIR-compliant description and comparison of crop phenotype data with standardized controlled vocabularies (2021)
Journal Article
Andrés-Hernández, L., Halimi, R. A., Mauleon, R., Mayes, S., Baten, A., & King, G. J. (2021). Challenges for FAIR-compliant description and comparison of crop phenotype data with standardized controlled vocabularies. Database, 2021, Article baab028. https://doi.org/10.1093/database/baab028

Crop phenotypic data underpin many pre-breeding efforts to characterize variation within germplasm collections. Although there has been an increase in the global capacity for accumulating and comparing such data, a lack of consistency in the systemat... Read More about Challenges for FAIR-compliant description and comparison of crop phenotype data with standardized controlled vocabularies.

Application of sodium selenate to cowpea (Vigna unguiculata L.) increases shoot and grain Se partitioning with strong genotypic interactions (2021)
Journal Article
Silva, V. M., Nardeli, A. J., Mendes, N. A. C., Alcock, T. D., Rocha, M. D. M., Putti, F. F., …Reis, A. R. D. (2021). Application of sodium selenate to cowpea (Vigna unguiculata L.) increases shoot and grain Se partitioning with strong genotypic interactions. Journal of Trace Elements in Medicine and Biology, 67, Article 126781. https://doi.org/10.1016/j.jtemb.2021.126781

Backgorund: Cowpea is a crop widely used in developing countries due its rusticity. Besides its rich genotypic variability, most breeding programs do not explore its potential to improve elements uptake. Selenium (Se) is a scarce element in most soil... Read More about Application of sodium selenate to cowpea (Vigna unguiculata L.) increases shoot and grain Se partitioning with strong genotypic interactions.

Generation of Doubled Haploid Wheat-Triticum urartu Introgression Lines and Their Characterisation Using Chromosome-Specific KASP Markers (2021)
Journal Article
Grewal, S., Guwela, V., Newell, C., Yang, C. Y., Ashling, S., Scholefield, D., …King, J. (2021). Generation of Doubled Haploid Wheat-Triticum urartu Introgression Lines and Their Characterisation Using Chromosome-Specific KASP Markers. Frontiers in Plant Science, 12, Article 643636. https://doi.org/10.3389/fpls.2021.643636

Wheat is one of the most important food and protein sources in the world and although, in recent years wheat breeders have achieved yield gains, they are not sufficient to meet the demands of an ever-growing population. Development of high yielding w... Read More about Generation of Doubled Haploid Wheat-Triticum urartu Introgression Lines and Their Characterisation Using Chromosome-Specific KASP Markers.

Comparison of quantitative trait loci (QTLs) associated with yield components in two commercial Dura × Pisifera breeding crosses (2021)
Journal Article
Zolkafli, S. H., Ngoot-Chin, T., Shazana, N., Ithnin, M., Mayes, S., Massawe, F., …Singh, R. (2021). Comparison of quantitative trait loci (QTLs) associated with yield components in two commercial Dura × Pisifera breeding crosses. Euphytica, 217, Article 104. https://doi.org/10.1007/s10681-021-02825-9

The high yielding tenera is the commercial oil palm planting material of choice in Southeast Asia. Notwithstanding this, there is continuous effort to further improve the yield and one way to do this is by addressing the yield components (YCs ). Usin... Read More about Comparison of quantitative trait loci (QTLs) associated with yield components in two commercial Dura × Pisifera breeding crosses.

The role of photoprotection in defence of two wheat genotypes against Zymoseptoria tritici (2021)
Journal Article
Ajigboye, O. O., Jayaweera, D. P., Angelopoulou, D., Ruban, A. V., Murchie, E. H., Pastor, V., …Ray, R. V. (2021). The role of photoprotection in defence of two wheat genotypes against Zymoseptoria tritici. Plant Pathology, 70(6), 1421-1435. https://doi.org/10.1111/ppa.13392

This study provides new insights into the role of photoprotection in preformed and induced defence of two wheat genotypes with contrasting phenotypes to infection by Zymoseptoria tritici. We investigated the mechanisms of the photoprotective response... Read More about The role of photoprotection in defence of two wheat genotypes against Zymoseptoria tritici.