All Outputs (612)

The prevalence and impact of Fusarium Head Blight pathogens and mycotoxins on malting barley quality in UK (2014)
Journal Article
Nielsen, L., Cook, D., Edwards, S., & Ray, R. (2014). The prevalence and impact of Fusarium Head Blight pathogens and mycotoxins on malting barley quality in UK. International Journal of Food Microbiology, 179, 38-49. https://doi.org/10.1016/j.ijfoodmicro.2014.03.023

Fusarium head blight (FHB) caused by Fusarium and Microdochium species can significantly affect the yield of barley grain as well as the quality and safety of malt and beer. The present study provides new knowledge on the impacts of the FHB pathogen... Read More about The prevalence and impact of Fusarium Head Blight pathogens and mycotoxins on malting barley quality in UK.

Systems Analysis of Auxin Transport in the Arabidopsis Root Apex (2014)
Journal Article
Band, L. R., Wells, D. M., Fozard, J. A., Ghetiu, T., French, A. P., Pound, M. P., …Bennett, M. J. (2014). Systems Analysis of Auxin Transport in the Arabidopsis Root Apex. Plant Cell, 26(3), 862-875. https://doi.org/10.1105/tpc.113.119495

Auxin is a key regulator of plant growth and development. Within the root tip, auxin distribution plays a crucial role specifying developmental zones and coordinating tropic responses. Determining how the organ-scale auxin pattern is regulated at the... Read More about Systems Analysis of Auxin Transport in the Arabidopsis Root Apex.

'Candidatus phytoplasma palmicola’: a novel taxon associated with a lethal yellowing-type disease (LYD) of coconut ( Cocos nucifera L.) in Mozambique (2014)
Journal Article
Harrison, N. A., Davis, R. E., Oropeza, C., Helmick, E. E., Narvaez, M., Eden-Green, S., Dollet, M., Dickinson, M., & Konan Konan, J. L. (2014). 'Candidatus phytoplasma palmicola’: a novel taxon associated with a lethal yellowing-type disease (LYD) of coconut ( Cocos nucifera L.) in Mozambique. International Journal of Systematic and Evolutionary Microbiology, 64(6), https://doi.org/10.1099/ijs.0.060053-0

In this study, the taxonomic position and group classification of the phytoplasma associated with a lethal yellowing-type disease (LYD) of coconut (Cocos nucifera L.) in Mozambique were addressed. Pairwise sequence similarity values based on alignmen... Read More about 'Candidatus phytoplasma palmicola’: a novel taxon associated with a lethal yellowing-type disease (LYD) of coconut ( Cocos nucifera L.) in Mozambique.

Dietary mineral supplies in Africa (2014)
Journal Article
Joy, E. J., Ander, E. L., Young, S. D., Black, C. R., Watts, M. J., Chilimba, A. D., Chilima, B., Siyame, E. W., Kalimbira, A. A., Hurst, R., Fairweather-Tait, S. J., Stein, A. J., Gibson, R. S., White, P. J., & Broadley, M. R. (2014). Dietary mineral supplies in Africa. Physiologia Plantarum, 151(3), 208-229. https://doi.org/10.1111/ppl.12144

Dietary micronutrient deficiencies (MNDs) are widespread, yet their prevalence can be difficult to assess. Here, we estimate MND risks due to inadequate intakes for seven minerals in Africa using food supply and composition data, and consider the pot... Read More about Dietary mineral supplies in Africa.

A genome-wide metabolomic resource for tomato fruit from Solanum pennellii (2014)
Journal Article
Perez-Fons, L., Wells, T., Corol, D. I., Ward, J. L., Gerrish, C., Beale, M. H., …Fraser, P. D. (in press). A genome-wide metabolomic resource for tomato fruit from Solanum pennellii. Scientific Reports, 4, Article 3859. https://doi.org/10.1038/srep03859

Tomato and its processed products are one of the most widely consumed fruits. Its domestication, however,
has resulted in the loss of some 95% of the genetic and chemical diversity of wild relatives. In order to
elucidate this diversity, exploit it... Read More about A genome-wide metabolomic resource for tomato fruit from Solanum pennellii.

Nitric oxide sensing in plants is mediated by proteolytic control of Group VII ERF transcription factors (2014)
Journal Article
Gibbs, D. J., Md Isa, N., Movahedi, M., Lozano-Juste, J., Mendiondo, G. M., Berckhan, S., …Holdsworth, M. J. (2014). Nitric oxide sensing in plants is mediated by proteolytic control of Group VII ERF transcription factors. Molecular Cell, 53(3), https://doi.org/10.1016/j.molcel.2013.12.020

Nitric oxide (NO) is an important signaling compound in prokaryotes and eukaryotes. In plants, NO regulates critical developmental transitions and stress responses. Here, we identify a mechanism for NO sensing that coordinates responses throughout de... Read More about Nitric oxide sensing in plants is mediated by proteolytic control of Group VII ERF transcription factors.

Small Ubiquitin-like Modifier Protein SUMO Enables Plants to Control Growth Independently of the Phytohormone Gibberellin (2014)
Journal Article
Conti, L., Nelis, S., Zhang, C., Woodcock, A., Swarup, R., Galbiati, M., …Sadanandom, A. (2014). Small Ubiquitin-like Modifier Protein SUMO Enables Plants to Control Growth Independently of the Phytohormone Gibberellin. Developmental Cell, 28(1), 102-110. https://doi.org/10.1016/j.devcel.2013.12.004

Plants survive adverse conditions by modulating their growth in response to a changing environment. Gibberellins (GAs) play a key role in these adaptive responses by stimulating the degradation of growth-repressing DELLA proteins. GA binding to its r... Read More about Small Ubiquitin-like Modifier Protein SUMO Enables Plants to Control Growth Independently of the Phytohormone Gibberellin.

Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending (2014)
Journal Article
Dyson, R. J., Vizcay-Barrena, G., Band, L. R., Fernandes, A. N., French, A. P., Fozard, J. A., …Jensen, O. E. (2014). Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending. New Phytologist, 202(4), 1212-1222. https://doi.org/10.1111/nph.12764

Root elongation and bending require the coordinated expansion of multiple cells of different types. These processes are regulated by the action of hormones that can target distinct cell layers. We use a mathematical model to characterise the influenc... Read More about Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending.

Computed tomography analysis of guinea pig bone: architecture, bone thickness and dimensions throughout development. (2014)
Journal Article
Witkowska, A., Alibhai, A., Hughes, C., Price, J., Klisch, K., Sturrock, C., & Rutland, C. S. (2014). Computed tomography analysis of guinea pig bone: architecture, bone thickness and dimensions throughout development. PeerJ, 2, Article e615. https://doi.org/10.7717/peerj.615

The domestic guinea pig, Cavia aperea f. porcellus, belongs to the Caviidae family of rodents. It is an important species as a pet, a source of food and in medical research. Adult weight is achieved at 8-12 months and life expectancy is ∼5-6 years. O... Read More about Computed tomography analysis of guinea pig bone: architecture, bone thickness and dimensions throughout development..

A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes (2014)
Journal Article
variation in root growth dynamics of Brassica rapa genotypes. Journal of Experimental Botany, 65(8), 2039-2048. https://doi.org/10.1093/jxb/eru048

The potential exists to breed for root system architectures that optimize resource acquisition. However, this requires the ability to screen root system development quantitatively, with high resolution, in as natural an environment as possible, with... Read More about A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes.

A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development (2013)
Journal Article
Cho, H., Ryu, H., Rho, S., Hill, K., Smith, S., Audenaert, D., …Hwang, I. (2014). A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development. Nature Cell Biology, 16(1), 66-76. https://doi.org/10.1038/ncb2893

The phytohormone auxin is a key developmental signal in plants. So far, only auxin perception has been described to trigger the release of transcription factors termed AUXIN RESPONSE FACTORs (ARFs) from their AUXIN/INDOLE-3-ACETIC ACID (AUX/IAA) repr... Read More about A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development.

Time-Profiling Fluorescent Reporters in the Arabidopsis Root (2013)
Book Chapter
Larrieu, A. P., French, A. P., Pridmore, T. P., Bennett, M. J., & Wells, D. M. (2014). Time-Profiling Fluorescent Reporters in the Arabidopsis Root. In Plant chemical genomics : methods and protocols (11-17). Springer. https://doi.org/10.1007/978-1-62703-592-7_2

Confocal laser scanning microscopy is a useful nondestructive approach for the visualization of fluorescent reporters in planta. Samples are usually placed between a slide and a cover slip which, although suited to single time-point imaging, does not... Read More about Time-Profiling Fluorescent Reporters in the Arabidopsis Root.

Nitrogen partitioning and remobilization in relation to leaf senescence, grain yield and grain nitrogen concentration in wheat cultivars (2013)
Journal Article

Our objective was to investigate the determinants of genetic variation in N accumulation, N partitioning and N remobilization to the grain post-flowering and associations with flag-leaf senescence, grain yield and grain N% in 16 wheat cultivars grown... Read More about Nitrogen partitioning and remobilization in relation to leaf senescence, grain yield and grain nitrogen concentration in wheat cultivars.

From jellyfish to biosensors: the use of fluorescent proteins in plants (2013)
Journal Article
Voss, U., Larrieu, A., & Wells, D. M. (2013). From jellyfish to biosensors: the use of fluorescent proteins in plants. International Journal of Developmental Biology, 57(6-7-8), 525-533. https://doi.org/10.1387/ijdb.130208dw

The milestone discovery of green fluorescent protein (GFP) from the jellyfish Aequorea victoria, its optimisation for efficient use in plantae, and subsequent improvements in techniques for fluorescent detection and quantification have changed plant... Read More about From jellyfish to biosensors: the use of fluorescent proteins in plants.

Comprehensive speciation of low-molecular weight selenium metabolites in mustard seeds using HPLC – electrospray linear trap/orbitrap tandem mass spectrometry (2013)
Journal Article
Ouerdane, L., Aureli, F., Flis, P., Bierla, K., Preud'homme, H., Cubadda, F., & Szpunar, J. (2013). Comprehensive speciation of low-molecular weight selenium metabolites in mustard seeds using HPLC – electrospray linear trap/orbitrap tandem mass spectrometry. Metallomics, 5(9), 1294. https://doi.org/10.1039/c3mt00113j

Identification of the tri-Al tricitrate complex in Plantago almogravensis by hydrophilic interaction LC with parallel ICP-MS and electrospray Orbitrap MS/MS detection (2013)
Journal Article
Grevenstuk, T., Flis, P., Ouerdane, L., Lobinski, R., & Romano, A. (2013). Identification of the tri-Al tricitrate complex in Plantago almogravensis by hydrophilic interaction LC with parallel ICP-MS and electrospray Orbitrap MS/MS detection. Metallomics, 5(9), 1285-1293. https://doi.org/10.1039/c3mt00101f

The identification of the ligands binding Al is essential to understand the mechanisms by which plants detoxify Al internally. However, studies concerning the speciation of Al have been frustrated by its complex chemistry. This work describes the ide... Read More about Identification of the tri-Al tricitrate complex in Plantago almogravensis by hydrophilic interaction LC with parallel ICP-MS and electrospray Orbitrap MS/MS detection.

A DArT marker genetic map of perennial ryegrass (Lolium perenne L.) integrated with detailed comparative mapping information; comparison with existing DArT marker genetic maps of Lolium perenne, L. multiflorum and Festuca pratensis (2013)
Journal Article
King, J., Thomas, A., James, C., King, I., & Armstead, I. (2013). A DArT marker genetic map of perennial ryegrass (Lolium perenne L.) integrated with detailed comparative mapping information; comparison with existing DArT marker genetic maps of Lolium perenne, L. multiflorum and Festuca pratensis. BMC Genomics, 14(1), Article 437. https://doi.org/10.1186/1471-2164-14-437

Background
Ryegrasses and fescues (genera, Lolium and Festuca) are species of forage and turf grasses which are used widely in agricultural and amenity situations. They are classified within the sub-family Pooideae and so are closely related to Brac... Read More about A DArT marker genetic map of perennial ryegrass (Lolium perenne L.) integrated with detailed comparative mapping information; comparison with existing DArT marker genetic maps of Lolium perenne, L. multiflorum and Festuca pratensis.

Effects of X-ray dose on rhizosphere studies using X-ray computed tomography (2013)
Journal Article
Zappala, S., Helliwell, J. R., Tracy, S., Mairhofer, S., Sturrock, C., Pridmore, T., Bennett, M. J., & Mooney, S. J. (2013). Effects of X-ray dose on rhizosphere studies using X-ray computed tomography. PLoS ONE, 8(6), Article e67250. https://doi.org/10.1371/journal.pone.0067250

X-ray Computed Tomography (CT) is a non-destructive imaging technique originally designed for diagnostic medicine, which was adopted for rhizosphere and soil science applications in the early 1980s. X-ray CT enables researchers to simultaneously visu... Read More about Effects of X-ray dose on rhizosphere studies using X-ray computed tomography.

RootNav: navigating images of complex root architectures (2013)
Journal Article
Pound, M. P., French, A. P., Atkinson, J. A., Wells, D. M., Bennett, M. J., & Pridmore, T. (2013). RootNav: navigating images of complex root architectures. Plant Physiology, 162(4), 1802-1814. https://doi.org/10.1104/pp.113.221531

We present a novel image analysis tool that allows the semiautomated quantification of complex root system architectures in a range of plant species grown and imaged in a variety of ways. The automatic component of RootNav takes a top-down approach,... Read More about RootNav: navigating images of complex root architectures.

A Survey Investigating the Infection of Fusarium langsethiae and Production of HT-2 and T-2 Mycotoxins in UK Oat Fields (2013)
Journal Article
Imathiu, S. M., Ray, R. V., Back, M. I., Hare, M. C., & Edwards, S. G. (2013). A Survey Investigating the Infection of Fusarium langsethiae and Production of HT-2 and T-2 Mycotoxins in UK Oat Fields. Journal of Phytopathology, 161(7-8), 553-561. https://doi.org/10.1111/jph.12105

Fusarium langsethiae is a toxigenic fungal species that has been reported in European small-grain cereal crops such as oats, wheat and barley. Although its relative contribution to fusarium head blight (FHB) symptoms is not well understood, it is rep... Read More about A Survey Investigating the Infection of Fusarium langsethiae and Production of HT-2 and T-2 Mycotoxins in UK Oat Fields.