All Outputs (17)

Mass screening of rice mutant populations at low CO2 for identification of lowered photorespiration and respiration rates (2023)
Journal Article
Mubarak, A. N., Burgess, A. J., Pyke, K., Quick, W. P., & Murchie, E. H. (2023). Mass screening of rice mutant populations at low CO2 for identification of lowered photorespiration and respiration rates. Frontiers in Plant Science, 14, Article 1125770. https://doi.org/10.3389/fpls.2023.1125770

Introduction: Identifying rice (Oryza sativa) germplasm with improved efficiency of primary metabolism is of utmost importance in order to increase yields. One such approach can be attained through screening genetically diverse populations under alte... Read More about Mass screening of rice mutant populations at low CO2 for identification of lowered photorespiration and respiration rates.

Paving the way towards future-proofing our crops (2023)
Journal Article
Baekelandt, A., Saltenis, V. L., Nacry, P., Malyska, A., Cornelissen, M., Nanda, A. K., …Parry, M. A. (2023). Paving the way towards future-proofing our crops. Food and Energy Security, 12(3), Article e441. https://doi.org/10.1002/fes3.441

To meet the increasing global demand for food, feed, fibre and other plant-derived products, a steep increase in crop productivity is a scientifically and technically challenging imperative. The CropBooster-P project, a response to the H2020 call ‘Fu... Read More about Paving the way towards future-proofing our crops.

Improving crop yield potential: Underlying biological processes and future prospects (2022)
Journal Article
Burgess, A. J., Masclaux‐Daubresse, C., Strittmatter, G., Weber, A. P. M., Taylor, S. H., Harbinson, J., …Baekelandt, A. (2023). Improving crop yield potential: Underlying biological processes and future prospects. Food and Energy Security, 12(1), Article e435. https://doi.org/10.1002/fes3.435

The growing world population and global increases in the standard of living both result in an increasing demand for food, feed and other plant‐derived products. In the coming years, plant‐based research will be among the major drivers ensuring food s... Read More about Improving crop yield potential: Underlying biological processes and future prospects.

Sunflecks in the upper canopy: dynamics of light-use efficiency in sun and shade leaves of Fagus sylvatica (2022)
Journal Article
Durand, M., Stangl, Z. R., Salmon, Y., Burgess, A. J., Murchie, E. H., & Robson, T. M. (2022). Sunflecks in the upper canopy: dynamics of light-use efficiency in sun and shade leaves of Fagus sylvatica. New Phytologist, 235(4), 1365-1378. https://doi.org/10.1111/nph.18222

Sunflecks are transient patches of direct radiation that provide a substantial proportion of the daily irradiance to leaves in the lower canopy. In this position, faster photosynthetic induction would allow for higher sunfleck-use efficiency, as is c... Read More about Sunflecks in the upper canopy: dynamics of light-use efficiency in sun and shade leaves of Fagus sylvatica.

Casting light on the architecture of crop yield (2022)
Journal Article
Murchie, E. H., & Burgess, A. J. (2022). Casting light on the architecture of crop yield. Crop and Environment, 1(1), 74-85. https://doi.org/10.1016/j.crope.2022.03.009

Crop canopy architecture is a central component of yield. The arrangement of leaves in three-dimensional space defines the efficiency of absorption of radiation and its conversion into dry matter at the canopy level. The description of architecture i... Read More about Casting light on the architecture of crop yield.

Prospects to improve the nutritional quality of crops (2021)
Journal Article
Scharff, L. B., Saltenis, V. L., Jensen, P. E., Baekelandt, A., Burgess, A. J., Burow, M., …Pribil, M. (2022). Prospects to improve the nutritional quality of crops. Food and Energy Security, 11(1), Article e327. https://doi.org/10.1002/fes3.327

A growing world population as well as the need to enhance sustainability and health create challenges for crop breeding. To address these challenges, not only quantitative but also qualitative improvements are needed, especially regarding the macro-... Read More about Prospects to improve the nutritional quality of crops.

The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy (2021)
Journal Article
Burgess, A. J., Durand, M., Retkute, R., Gibbs, J. A., Robson, T. M., & Murchie, E. H. (2021). The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy. Plant, Cell and Environment, 44(11), 3524-3537. https://doi.org/10.1111/pce.14168

Under field conditions, plants are subject to wind-induced movement which creates fluctuations of light intensity and spectral quality reaching the leaves, defined here as windflecks. Within this study, irradiance within two contrasting wheat (Tritic... Read More about The effect of canopy architecture on the patterning of “windflecks” within a wheat canopy.

Interactions between nitrogen nutrition, canopy architecture and photosynthesis in rice, assessed using high-resolution 3D reconstruction (2020)
Journal Article
Burgess, A. J., Herman, T., Ali, A., & Murchie, E. H. (2021). Interactions between nitrogen nutrition, canopy architecture and photosynthesis in rice, assessed using high-resolution 3D reconstruction. in silico Plants, 3(1), https://doi.org/10.1093/insilicoplants/diaa017

Increasing nitrogen use efficiency is a key target for yield improvement programs. Here we identify features of rice canopy architecture during altered N availability and link them to photosynthetic productivity. Empirical mathematical modelling, hig... Read More about Interactions between nitrogen nutrition, canopy architecture and photosynthesis in rice, assessed using high-resolution 3D reconstruction.

Photoprotective energy dissipation is greater in the lower, not the upper, regions of a rice canopy: A 3D analysis (2020)
Journal Article
Foo, C., Burgess, A., Retkute, R., Tree-Intong, P., Ruban, A., & Murchie, E. (2020). Photoprotective energy dissipation is greater in the lower, not the upper, regions of a rice canopy: A 3D analysis. Journal of Experimental Botany, 71(22), 7382-7392. https://doi.org/10.1093/jxb/eraa411

© 2020 The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Experimental Biology. High light intensities raise photosynthetic and plant growth rates but can cause damage to the photosynthetic machinery. The likelihood... Read More about Photoprotective energy dissipation is greater in the lower, not the upper, regions of a rice canopy: A 3D analysis.

Recovering Wind-induced Plant motion in Dense Field Environments via Deep Learning and Multiple Object Tracking (2019)
Journal Article
Gibbs, J. A., Burgess, A. J., Pound, M. P., Pridmore, T. P., & Murchie, E. H. (2019). Recovering Wind-induced Plant motion in Dense Field Environments via Deep Learning and Multiple Object Tracking. Plant Physiology, 181, 28-42. https://doi.org/10.1104/pp.19.00141

Understanding the relationships between local environmental conditions and plant structure and function is critical for both fundamental science and for improving the performance of crops in field settings. Wind-induced plant motion is important in m... Read More about Recovering Wind-induced Plant motion in Dense Field Environments via Deep Learning and Multiple Object Tracking.

Three-dimensional plant architecture and sunlit-shaded patterns: a stochastic model of light dynamics in canopies (2018)
Journal Article
Retkute, R., Townsend, A. J., Murchie, E. H., Jensen, O. E., & Preston, S. P. (2018). Three-dimensional plant architecture and sunlit-shaded patterns: a stochastic model of light dynamics in canopies. Annals of Botany, 122(2), 291–302. https://doi.org/10.1093/aob/mcy067

Background and Aims Diurnal changes in solar position and intensity combined with the structural complexity of plant architecture result in highly variable and dynamic light patterns within the plant canopy. This affects productivity through the comp... Read More about Three-dimensional plant architecture and sunlit-shaded patterns: a stochastic model of light dynamics in canopies.

Suboptimal acclimation of photosynthesis to light in wheat canopies (2018)
Journal Article
Townsend, A. J., Retkute, R., Chinnathambi, K., Randall, J. W., Foulkes, J. F., Carmo-Silva, E., & Murchie, E. H. (in press). Suboptimal acclimation of photosynthesis to light in wheat canopies. Plant Physiology, 176(2), https://doi.org/10.1104/pp.17.01213

Photosynthetic acclimation (photoacclimation) is the process whereby leaves alter their morphology and/or biochemistry to optimise photosynthetic efficiency and productivity according to long-term changes in the light environment. Three-dimensional (... Read More about Suboptimal acclimation of photosynthesis to light in wheat canopies.

Deep machine learning provides state-of-the-art performance in image-based plant phenotyping (2017)
Journal Article
Pound, M. P., Atkinson, J. A., Townsend, A. J., Wilson, M. H., Griffiths, M., Jackson, A. S., …French, A. P. (2017). Deep machine learning provides state-of-the-art performance in image-based plant phenotyping. GigaScience, 6(10), Article gix083. https://doi.org/10.1093/gigascience/gix083

© The Author 2017. In plant phenotyping, it has become important to be able to measure many features on large image sets in order to aid genetic discovery. The size of the datasets, now often captured robotically, often precludes manual inspection, h... Read More about Deep machine learning provides state-of-the-art performance in image-based plant phenotyping.

Exploring Relationships between Canopy Architecture, Light Distribution, and Photosynthesis in Contrasting Rice Genotypes Using 3D Canopy Reconstruction (2017)
Journal Article
Burgess, A. J., Retkute, R., Herman, T., & Murchie, E. H. (2017). Exploring Relationships between Canopy Architecture, Light Distribution, and Photosynthesis in Contrasting Rice Genotypes Using 3D Canopy Reconstruction. Frontiers in Plant Science, 8, Article 734. https://doi.org/10.3389/fpls.2017.00734

The arrangement of leaf material is critical in determining the light environment, and subsequently the photosynthetic productivity of complex crop canopies. However, links between specific canopy architectural traits and photosynthetic productivity... Read More about Exploring Relationships between Canopy Architecture, Light Distribution, and Photosynthesis in Contrasting Rice Genotypes Using 3D Canopy Reconstruction.

The 4-Dimensional Plant: Effects of Wind-Induced Canopy Movement on Light Fluctuations and Photosynthesis (2016)
Journal Article
Burgess, A. J., Retkute, R., Preston, S. P., Jensen, O. E., Pound, M. P., Pridmore, T. P., & Murchie, E. H. (2016). The 4-Dimensional Plant: Effects of Wind-Induced Canopy Movement on Light Fluctuations and Photosynthesis. Frontiers in Plant Science, 7(1392), https://doi.org/10.3389/fpls.2016.01392

Physical perturbation of a plant canopy brought about by wind is a ubiquitous phenomenon and yet its biological importance has often been overlooked. This is partly due to the complexity of the issue at hand: wind-induced movement (or mechanical exci... Read More about The 4-Dimensional Plant: Effects of Wind-Induced Canopy Movement on Light Fluctuations and Photosynthesis.

High-Resolution Three-Dimensional Structural Data Quantify the Impact of Photoinhibition on Long-Term Carbon Gain in Wheat Canopies in the Field (2015)
Journal Article
Burgess, A. J., Retkute, R., Pound, M. P., Foulkes, J., Preston, S. P., Jensen, O. E., …Murchie, E. H. (2015). High-Resolution Three-Dimensional Structural Data Quantify the Impact of Photoinhibition on Long-Term Carbon Gain in Wheat Canopies in the Field. Plant Physiology, 169(2), 1192-1204. https://doi.org/10.1104/pp.15.00722

Photoinhibition reduces photosynthetic productivity; however, it is difficult to quantify accurately in complex canopies partly because of a lack of high-resolution structural data on plant canopy architecture, which determines complex fluctuations o... Read More about High-Resolution Three-Dimensional Structural Data Quantify the Impact of Photoinhibition on Long-Term Carbon Gain in Wheat Canopies in the Field.

Exploiting heterogeneous environments: does photosynthetic acclimation optimize carbon gain in fluctuating light? (2015)
Journal Article
Retkute, R., Smith-Unna, S. E., Smith, R. W., Burgess, A. J., Jensen, O. E., Johnson, G. N., …Murchie, E. H. (2015). Exploiting heterogeneous environments: does photosynthetic acclimation optimize carbon gain in fluctuating light?. Journal of Experimental Botany, 66(9), 2437-2447. https://doi.org/10.1093/jxb/erv055

Plants have evolved complex mechanisms to balance the efficient use of absorbed light energy in photosynthesis with the capacity to use that energy in assimilation, so avoiding potential damage from excess light. This is particularly important under... Read More about Exploiting heterogeneous environments: does photosynthetic acclimation optimize carbon gain in fluctuating light?.