Skip to main content

Research Repository

Advanced Search

TopoGSA: network topological gene set analysis

Glaab, Enrico; Baudot, Anais; Krasnogor, Natalio; Valencia, Alfonso

Authors

Enrico Glaab

Anais Baudot

Natalio Krasnogor

Alfonso Valencia



Abstract

TopoGSA (Topology-based Gene Set Analysis) is a web-application dedicated to the computation and visualization of network topological properties for gene and protein sets in molecular interaction networks. Different topological characteristics, such as the centrality of nodes in the network or their tendency to form clusters, can be computed and compared with those of known cellular pathways and processes.

Citation

Glaab, E., Baudot, A., Krasnogor, N., & Valencia, A. (2010). TopoGSA: network topological gene set analysis. Bioinformatics, 26(9), doi:10.1093/bioinformatics/btq131

Journal Article Type Article
Publication Date Mar 24, 2010
Deposit Date Jul 28, 2012
Publicly Available Date Jul 28, 2012
Journal Bioinformatics
Print ISSN 1367-4803
Electronic ISSN 1367-4803
Publisher Oxford University Press (OUP)
Peer Reviewed Peer Reviewed
Volume 26
Issue 9
DOI https://doi.org/10.1093/bioinformatics/btq131
Public URL http://eprints.nottingham.ac.uk/id/eprint/1423
Publisher URL http://bioinformatics.oxfordjournals.org/content/26/9/1271.full
Copyright Statement Copyright information regarding this work can be found at the following address: http://eprints.nottingham.ac.uk/end_user_agreement.pdf
Additional Information This is a pre-copy-editing, author-produced PDF of an article accepted for publication in Bioinformatics following peer review. The definitive publisher-authenticated version: Glaab, E., Baudot, A., Krasnogor, N.& Valencia, A., TopoGSA: network topological gene set analysis, Bioinformatics (2010) 26 (9): 1271-1272.
doi: 10.1093/bioinformatics/btq131 is available online at: http://bioinformatics.oxfordjournals.org/content/26/9/1271.full

Files


topogsa_manuscript_postprint.pdf (194 Kb)
PDF

Copyright Statement
Copyright information regarding this work can be found at the following address: http://eprints.nottingham.ac.uk/end_user_agreement.pdf





Downloadable Citations