Kurt G. Schilling
Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?
Schilling, Kurt G.; Rheault, François; Petit, Laurent; Hansen, Colin B.; Nath, Vishwesh; Yeh, Fang Cheng; Girard, Gabriel; Barakovic, Muhamed; Rafael-Patino, Jonathan; Yu, Thomas; Fischi-Gomez, Elda; Pizzolato, Marco; Ocampo-Pineda, Mario; Schiavi, Simona; Canales-Rodríguez, Erick J.; Daducci, Alessandro; Granziera, Cristina; Innocenti, Giorgio; Thiran, Jean Philippe; Mancini, Laura; Wastling, Stephen; Cocozza, Sirio; Petracca, Maria; Pontillo, Giuseppe; Mancini, Matteo; Vos, Sjoerd B.; Vakharia, Vejay N.; Duncan, John S.; Melero, Helena; Manzanedo, Lidia; Sanz-Morales, Emilio; Peña-Melián, Ángel; Calamante, Fernando; Attyé, Arnaud; Cabeen, Ryan P.; Korobova, Laura; Toga, Arthur W.; Vijayakumari, Anupa Ambili; Parker, Drew; Verma, Ragini; Radwan, Ahmed; Sunaert, Stefan; Emsell, Louise; De Luca, Alberto; Leemans, Alexander; Bajada, Claude J.; Haroon, Hamied; Azadbakht, Hojjatollah; Chamberland, Maxime; Genc, Sila; Tax, Chantal M.W.; Yeh, Ping Hong; Srikanchana, Rujirutana; Mcknight, Col...
Authors
François Rheault
Laurent Petit
Colin B. Hansen
Vishwesh Nath
Fang Cheng Yeh
Gabriel Girard
Muhamed Barakovic
Jonathan Rafael-Patino
Thomas Yu
Elda Fischi-Gomez
Marco Pizzolato
Mario Ocampo-Pineda
Simona Schiavi
Erick J. Canales-Rodríguez
Alessandro Daducci
Cristina Granziera
Giorgio Innocenti
Jean Philippe Thiran
Laura Mancini
Stephen Wastling
Sirio Cocozza
Maria Petracca
Giuseppe Pontillo
Matteo Mancini
Sjoerd B. Vos
Vejay N. Vakharia
John S. Duncan
Helena Melero
Lidia Manzanedo
Emilio Sanz-Morales
Ángel Peña-Melián
Fernando Calamante
Arnaud Attyé
Ryan P. Cabeen
Laura Korobova
Arthur W. Toga
Anupa Ambili Vijayakumari
Drew Parker
Ragini Verma
Ahmed Radwan
Stefan Sunaert
Louise Emsell
Alberto De Luca
Alexander Leemans
Claude J. Bajada
Hamied Haroon
Hojjatollah Azadbakht
Maxime Chamberland
Sila Genc
Chantal M.W. Tax
Ping Hong Yeh
Rujirutana Srikanchana
Colin D. Mcknight
Joseph Yuan-Mou Yang
JIAN CHEN JIAN.CHEN@NOTTINGHAM.AC.UK
Associate Professor
Claire E. Kelly
Chun Hung Yeh
Jerome Cochereau
Jerome J. Maller
Thomas Welton
Fabien Almairac
Kiran K Seunarine
Chris A. Clark
Fan Zhang
Nikos Makris
Alexandra Golby
Yogesh Rathi
Lauren J. O'Donnell
Yihao Xia
Dogu Baran Aydogan
Yonggang Shi
Francisco Guerreiro Fernandes
Mathijs Raemaekers
Dr SHAUN WARRINGTON Shaun.Warrington1@nottingham.ac.uk
Research Fellow
Stijn Michielse
Alonso Ramírez-Manzanares
Luis Concha
Ramón Aranda
Mariano Rivera Meraz
Garikoitz Lerma-Usabiaga
Lucas Roitman
Lucius S. Fekonja
Navona Calarco
Michael Joseph
Hajer Nakua
Aristotle N. Voineskos
Philippe Karan
Gabrielle Grenier
Jon Haitz Legarreta
Nagesh Adluru
Veena A. Nair
Vivek Prabhakaran
Andrew L. Alexander
Koji Kamagata
Yuya Saito
Wataru Uchida
Christina Andica
Masahiro Abe
Roza G. Bayrak
Claudia A.M. Gandini Wheeler-Kingshott
Egidio D'Angelo
Fulvia Palesi
Giovanni Savini
Nicolò Rolandi
Pamela Guevara
Josselin Houenou
Narciso López-López
Jean-François Mangin
Cyril Poupon
Claudio Román
Andrea Vázquez
Chiara Maffei
Mavilde Arantes
José Paulo Andrade
Susana Maria Silva
Vince D. Calhoun
Eduardo Caverzasi
Simone Sacco
Michael Lauricella
Franco Pestilli
Daniel Bullock
Yang Zhan
Edith Brignoni-Perez
Catherine Lebel
Jess E Reynolds
Igor Nestrasil
René Labounek
Christophe Lenglet
Amy Paulson
Stefania Aulicka
Sarah R. Heilbronner
Katja Heuer
Bramsh Qamar Chandio
Javier Guaje
Wei Tang
Eleftherios Garyfallidis
Rajikha Raja
Adam W. Anderson
Bennett A. Landman
Maxime Descoteaux
Abstract
White matter bundle segmentation using diffusion MRI fiber tractography has become the method of choice to identify white matter fiber pathways in vivo in human brains. However, like other analyses of complex data, there is considerable variability in segmentation protocols and techniques. This can result in different reconstructions of the same intended white matter pathways, which directly affects tractography results, quantification, and interpretation. In this study, we aim to evaluate and quantify the variability that arises from different protocols for bundle segmentation. Through an open call to users of fiber tractography, including anatomists, clinicians, and algorithm developers, 42 independent teams were given processed sets of human whole-brain streamlines and asked to segment 14 white matter fascicles on six subjects. In total, we received 57 different bundle segmentation protocols, which enabled detailed volume-based and streamline-based analyses of agreement and disagreement among protocols for each fiber pathway. Results show that even when given the exact same sets of underlying streamlines, the variability across protocols for bundle segmentation is greater than all other sources of variability in the virtual dissection process, including variability within protocols and variability across subjects. In order to foster the use of tractography bundle dissection in routine clinical settings, and as a fundamental analytical tool, future endeavors must aim to resolve and reduce this heterogeneity. Although external validation is needed to verify the anatomical accuracy of bundle dissections, reducing heterogeneity is a step towards reproducible research and may be achieved through the use of standard nomenclature and definitions of white matter bundles and well-chosen constraints and decisions in the dissection process.
Citation
Schilling, K. G., Rheault, F., Petit, L., Hansen, C. B., Nath, V., Yeh, F. C., …Descoteaux, M. (2021). Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?. NeuroImage, 243, Article 118502. https://doi.org/10.1016/j.neuroimage.2021.118502
Journal Article Type | Article |
---|---|
Acceptance Date | Aug 21, 2021 |
Online Publication Date | Aug 25, 2021 |
Publication Date | Nov 1, 2021 |
Deposit Date | Jun 10, 2022 |
Publicly Available Date | Jun 15, 2022 |
Journal | NeuroImage |
Print ISSN | 1053-8119 |
Electronic ISSN | 1095-9572 |
Publisher | Elsevier |
Peer Reviewed | Peer Reviewed |
Volume | 243 |
Article Number | 118502 |
DOI | https://doi.org/10.1016/j.neuroimage.2021.118502 |
Keywords | Cognitive Neuroscience; Neurology |
Public URL | https://nottingham-repository.worktribe.com/output/6506889 |
Publisher URL | https://www.sciencedirect.com/science/article/pii/S1053811921007758?via%3Dihub |
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Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?
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Publisher Licence URL
https://creativecommons.org/licenses/by-nc-nd/4.0/
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