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Calcium oscillations (2007)
Book Chapter
Thul, R., Bellamy, T., Roderick, L., Bootman, M., & Coombes, S. (2007). Calcium oscillations. In M. Maroto, & N. Monk (Eds.), Cellular Oscillatory Mechanisms. Springer

Changes in cellular calcium concentration control a wide range of physiological processes, from the subsecond release of synaptic neurotransmitters, to the regulation of gene expression over months or years. Calcium can also trigger cell death throu... Read More about Calcium oscillations.

The role of cannabinoids in the neurobiology of sensory gating: a firing rate model study (2006)
Journal Article
Zachariou, M., Dissanayake, D., Owen, M. R., Mason, R., & Coombes, S. The role of cannabinoids in the neurobiology of sensory gating: a firing rate model study. Neurocomputing, 70(10/12), https://doi.org/10.1016/j.neucom.2006.10.065

Gating of sensory (e.g. auditory) information has been demonstrated as a reduction in the auditory-evoked potential responses recorded in the brain of both normal animals and human subjects. Auditory gating is perturbed in schizophrenic patients and... Read More about The role of cannabinoids in the neurobiology of sensory gating: a firing rate model study.

Spatio-temporal filtering properties of a dendritic cable with active spines: A modeling study in the spike-diffuse-spike framework (2006)
Journal Article
Timofeeva, Y., Lord, G., & Coombes, S. (2006). Spatio-temporal filtering properties of a dendritic cable with active spines: A modeling study in the spike-diffuse-spike framework. Journal of Computational Neuroscience, 21(3), 293-306. https://doi.org/10.1007/s10827-006-8776-4

The spike-diffuse-spike (SDS) model describes a passive dendritic tree with active dendritic spines. Spine-head dynamics is modeled with a simple integrate-and-fire process, whilst communication between spines is mediated by the cable equation. In th... Read More about Spatio-temporal filtering properties of a dendritic cable with active spines: A modeling study in the spike-diffuse-spike framework.

Mode locking in a periodically forced "ghostbursting" neuron model (2005)
Journal Article
Laing, C. R., & Coombes, S. (2005). Mode locking in a periodically forced "ghostbursting" neuron model. International Journal of Bifurcation and Chaos, 15(4), 1433-1444. https://doi.org/10.1142/S0218127405012557

We study a minimal integrate-and-fire based model of a " ghostbursting" neuron under periodic stimulation. These neurons are involved in sensory processing in weakly electric fish. There exist regions in parameter space in which the model neuron is m... Read More about Mode locking in a periodically forced "ghostbursting" neuron model.

Bumps, breathers, and waves in a neural network with spike frequency adaptation (2005)
Journal Article
Coombes, S., & Owen, M. R. (2005). Bumps, breathers, and waves in a neural network with spike frequency adaptation. Physical Review Letters, 94(14), https://doi.org/10.1103/PhysRevLett.94.148102

In this Letter we introduce a continuum model of neural tissue that include the effects of so-called spike frequency adaptation (SFA). The basic model is an integral equation for synaptic activity that depends upon the non-local network connectivity... Read More about Bumps, breathers, and waves in a neural network with spike frequency adaptation.

Directed percolation in a two dimensional stochastic fire-diffuse-fire model (2004)
Journal Article
Timofeeva, Y., & Coombes, S. (2004). Directed percolation in a two dimensional stochastic fire-diffuse-fire model

In this paper we establish, from extensive numerical experiments, that the two dimensional stochastic fire-diffuse-fire model belongs to the directed percolation universality class. This model is an idealized model of intracellular calcium release th... Read More about Directed percolation in a two dimensional stochastic fire-diffuse-fire model.

Evans functions for integral neural field equations with Heaviside firing rate function (2004)
Journal Article
Coombes, S., & Owen, M. R. Evans functions for integral neural field equations with Heaviside firing rate function. SIAM Journal on Applied Dynamical Systems, 3(4), https://doi.org/10.1137/040605953

In this paper we show how to construct the Evans function for traveling wave solutions of integral neural field equations when the firing rate function is a Heaviside. This allows a discussion of wave stability and bifurcation as a function of syste... Read More about Evans functions for integral neural field equations with Heaviside firing rate function.

The importance of different timings of excitatory and inhibitory pathways in neural field models
Journal Article
Laing, C., & Coombes, S. The importance of different timings of excitatory and inhibitory pathways in neural field models

In this paper we consider a neural field model comprised of two distinct populations of neurons, excitatory and inhibitory, for which both the velocities of action potential propagation and the time courses of synaptic processing are different. Using... Read More about The importance of different timings of excitatory and inhibitory pathways in neural field models.

Dendritic cable with active spines: a modeling study in the spike-diffuse-spike framework
Journal Article
Timofeeva, Y., Lord, G., & Coombes, S. Dendritic cable with active spines: a modeling study in the spike-diffuse-spike framework. https://doi.org/10.1016/j.neucom.2005.12.045

The spike-diffuse-spike (SDS) model describes a passive dendritic tree with active dendritic spines. Spine-head dynamics is modelled with a simple integrate-and-fire process, whilst communication between spines is mediated by the cable equation. Her... Read More about Dendritic cable with active spines: a modeling study in the spike-diffuse-spike framework.