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brainlife.io: a decentralized and open-source cloud platform to support neuroscience research

Hayashi, Soichi; Caron, Bradley A.; Heinsfeld, Anibal Sólon; Vinci-Booher, Sophia; McPherson, Brent; Bullock, Daniel N.; Bertò, Giulia; Niso, Guiomar; Hanekamp, Sandra; Levitas, Daniel; Ray, Kimberly; MacKenzie, Anne; Avesani, Paolo; Kitchell, Lindsey; Leong, Josiah K.; Nascimento-Silva, Filipi; Koudoro, Serge; Willis, Hanna; Jolly, Jasleen K.; Pisner, Derek; Zuidema, Taylor R.; Kurzawski, Jan W.; Mikellidou, Kyriaki; Bussalb, Aurore; Chaumon, Maximilien; George, Nathalie; Rorden, Christopher; Victory, Conner; Bhatia, Dheeraj; Aydogan, Dogu Baran; Yeh, Fang-Cheng F.; Delogu, Franco; Guaje, Javier; Veraart, Jelle; Fischer, Jeremy; Faskowitz, Joshua; Fabrega, Ricardo; Hunt, David; McKee, Shawn; Brown, Shawn T.; Heyman, Stephanie; Iacovella, Vittorio; Mejia, Amanda F.; Marinazzo, Daniele; Craddock, R. Cameron; Olivetti, Emanuale; Hanson, Jamie L.; Garyfallidis, Eleftherios; Stanzione, Dan; Carson, James; Henschel, Robert; Hancock, David Y.; Stewart, Craig A.; Schnyer, David; Eke, Damian O...

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Authors

Soichi Hayashi

Bradley A. Caron

Anibal Sólon Heinsfeld

Sophia Vinci-Booher

Brent McPherson

Daniel N. Bullock

Giulia Bertò

Guiomar Niso

Sandra Hanekamp

Daniel Levitas

Kimberly Ray

Anne MacKenzie

Paolo Avesani

Lindsey Kitchell

Josiah K. Leong

Filipi Nascimento-Silva

Serge Koudoro

Hanna Willis

Jasleen K. Jolly

Derek Pisner

Taylor R. Zuidema

Jan W. Kurzawski

Kyriaki Mikellidou

Aurore Bussalb

Maximilien Chaumon

Nathalie George

Christopher Rorden

Conner Victory

Dheeraj Bhatia

Dogu Baran Aydogan

Fang-Cheng F. Yeh

Franco Delogu

Javier Guaje

Jelle Veraart

Jeremy Fischer

Joshua Faskowitz

Ricardo Fabrega

David Hunt

Shawn McKee

Shawn T. Brown

Stephanie Heyman

Vittorio Iacovella

Amanda F. Mejia

Daniele Marinazzo

R. Cameron Craddock

Emanuale Olivetti

Jamie L. Hanson

Eleftherios Garyfallidis

Dan Stanzione

James Carson

Robert Henschel

David Y. Hancock

Craig A. Stewart

David Schnyer

DAMIAN EKE Damian.Eke@nottingham.ac.uk
Transitional Assistant Professor

Russell A. Poldrack

Steffen Bollman

Ashley Stewart

Holly Bridge

Ilaria Sani

Winrich A. Freiwald

Aina Puce

Nicholas L. Port

Franco Pestilli



Abstract

Neuroscience is advancing standardization and tool development to support rigor and transparency. Consequently, data pipeline complexity has increased, hindering FAIR (findable, accessible, interoperable and reusable) access. brainlife.io was developed to democratize neuroimaging research. The platform provides data standardization, management, visualization and processing and automatically tracks the provenance history of thousands of data objects. Here, brainlife.io is described and evaluated for validity, reliability, reproducibility, replicability and scientific utility using four data modalities and 3,200 participants.

Citation

Hayashi, S., Caron, B. A., Heinsfeld, A. S., Vinci-Booher, S., McPherson, B., Bullock, D. N., …Pestilli, F. (2024). brainlife.io: a decentralized and open-source cloud platform to support neuroscience research. Nature Methods, 21, 809-813. https://doi.org/10.1038/s41592-024-02237-2

Journal Article Type Article
Acceptance Date Mar 5, 2024
Online Publication Date Apr 11, 2024
Publication Date 2024-05
Deposit Date Apr 12, 2024
Publicly Available Date Apr 16, 2024
Journal Nature Methods
Print ISSN 1548-7091
Electronic ISSN 1548-7105
Publisher Nature Publishing Group
Peer Reviewed Peer Reviewed
Volume 21
Pages 809-813
DOI https://doi.org/10.1038/s41592-024-02237-2
Keywords Cognitive neuroscience ; Computational neuroscience; Databases; Technology; Translational research
Public URL https://nottingham-repository.worktribe.com/output/33565395
Publisher URL ttps://www.nature.com/articles/s41592-024-02237-2

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