CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism

Puzniak, Robert J.; Prabhakaran, Gokulraj T.; McLean, Rebecca J.; Stober, Sebastian; Ather, Sarim; Proudlock, Frank A.; Gottlob, Irene; Dineen, Robert A.; Hoffmann, Michael B.

Abstract

Purpose: Albinism is a congenital disorder affecting pigmentation levels, structure, and function of the visual system. The identification of anatomical changes typical for people with albinism (PWA), such as optic chiasm malformations, could become an important component of diagnostics. Here, we tested an application of convolutional neural networks (CNNs) for this purpose.

Methods: We established and evaluated a CNN, referred to as CHIASM-Net, for the detection of chiasmal malformations from anatomic magnetic resonance (MR) images of the brain. CHIASM-Net, composed of encoding and classification modules, was developed using MR images of controls (n = 1708) and PWA (n = 32). Evaluation involved 8-fold cross validation involving accuracy, precision, recall, and F1-score metrics and was performed on a subset of controls and PWA samples excluded from the training. In addition to quantitative metrics, we used Explainable AI (XAI) methods that granted insights into factors driving the predictions of CHIASM-Net.

Results: The results for the scenario indicated an accuracy of 85 ± 14%, precision of 90 ± 14% and recall of 81 ± 18%. XAI methods revealed that the predictions of CHIASM-Net are driven by optic-chiasm white matter and by the optic tracts.

Conclusions: CHIASM-Net was demonstrated to use relevant regions of the optic chiasm for albinism detection from magnetic resonance imaging (MRI) brain anatomies. This indicates the strong potential of CNN-based approaches for visual pathway analysis and ultimately diagnostics.

Citation

Puzniak, R. J., Prabhakaran, G. T., McLean, R. J., Stober, S., Ather, S., Proudlock, F. A., Gottlob, I., Dineen, R. A., & Hoffmann, M. B. (2023). CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism. Investigative Ophthalmology & Visual Science, 64(13), Article 14. https://doi.org/10.1167/iovs.64.13.14

• Journal Article Type: Article
• Acceptance Date: Sep 6, 2023
• Online Publication Date: Oct 10, 2023
• Publication Date: 2023-10
• Deposit Date: Nov 14, 2023
• Publicly Available Date: Nov 14, 2023
• Journal: Investigative Opthalmology & Visual Science
• Print ISSN: 0146-0404
• Electronic ISSN: 1552-5783
• Publisher: Association for Research in Vision and Ophthalmology
• Peer Reviewed: Peer Reviewed
• Volume: 64
• Issue: 13
• Article Number: 14
• DOI: https://doi.org/10.1167/iovs.64.13.14
• Public URL: https://nottingham-repository.worktribe.com/output/26519290
• Publisher URL: https://iovs.arvojournals.org/article.aspx?articleid=2792909