Outputs (4)

Three-dimensional reconstruction of plant shoots from multiple images using an active vision system (2015)
Journal Article
Gibbs, J., Pound, M. P., Wells, D. M., Murchie, E. H., French, A. P., & Pridmore, T. P. (2015). Three-dimensional reconstruction of plant shoots from multiple images using an active vision system

The reconstruction of 3D models of plant shoots is a challenging problem central to the emerging discipline of plant phenomics – the quantitative measurement of plant structure and function. Current approaches are, however, often limited by the use o... Read More about Three-dimensional reconstruction of plant shoots from multiple images using an active vision system.

Visual tracking for the recovery of multiple interacting plant root systems from X-ray μCT images (2015)
Journal Article
Mairhofer, S., Johnson, J., Sturrock, C., Bennett, M. J., Mooney, S. J., & Pridmore, T. P. (2016). Visual tracking for the recovery of multiple interacting plant root systems from X-ray μCT images. Machine Vision and Applications, 27(5), 721-734. https://doi.org/10.1007/s00138-015-0733-7

We propose a visual object tracking framework for the extraction of multiple interacting plant root systems from three-dimensional X-ray micro computed tomography images of plants grown in soil. Our method is based on a level set framework guided by... Read More about Visual tracking for the recovery of multiple interacting plant root systems from X-ray μCT images.

Extracting multiple interacting root systems using X-ray microcomputed tomography (2015)
Journal Article
Mairhofer, S., Sturrock, C., Mooney, S. J., Pridmore, T. P., & Bennett, M. J. (2015). Extracting multiple interacting root systems using X-ray microcomputed tomography. Plant Journal, 84(5), 1034-1043. https://doi.org/10.1111/tpj.13047

© 2015 The Authors The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd. Root system interactions and competition for resources are active areas of research that contribute to our understanding of how roots perc... Read More about Extracting multiple interacting root systems using X-ray microcomputed tomography.

Root system markup language: Toward a unified root architecture description language (2015)
Journal Article
Meunier, F., Lobet, G., Pound, M. P., Diener, J., Pradal, C., Draye, X., Godin, C., Javaux, M., Leitner, D., Meunier, F., Nacry, P., Pridmore, T. P., & Schnepf, A. (2015). Root system markup language: Toward a unified root architecture description language. Plant Physiology, 167(3), 617-627. https://doi.org/10.1104/pp.114.253625

© 2015 American Society of Plant Biologists. All rights reserved. The number of image analysis tools supporting the extraction of architectural features of root systems has increased in recent years. These tools offer a handy set of complementary fac... Read More about Root system markup language: Toward a unified root architecture description language.