Outputs (720)

De novo transcriptome assembly of hyperaccumulating Noccaea praecox for gene discovery (2023)
Journal Article
Bočaj, V., Pongrac, P., Fischer, S., & Likar, M. (2023). De novo transcriptome assembly of hyperaccumulating Noccaea praecox for gene discovery. Scientific Data, 10, Article 856. https://doi.org/10.1038/s41597-023-02776-x

Hyperaccumulators are a group of plant species that accumulate high concentrations of one or more metal(loid)s in their above-ground tissues without showing any signs of toxicity. Several hyperaccumulating species belong to the Brassicaceae family, a... Read More about De novo transcriptome assembly of hyperaccumulating Noccaea praecox for gene discovery.

HI from the Sky: Estimating harvest index from UAVs combined with machine learning (2023)
Journal Article
Burgess, A. J. (2024). HI from the Sky: Estimating harvest index from UAVs combined with machine learning. Plant Physiology, 194(3), 1257-1259. https://doi.org/10.1093/plphys/kiad611

Reciprocal regulation of NagC and quorum sensing systems and their roles in hmsHFRS expression and biofilm formation in Yersinia pseudotuberculosis (2023)
Journal Article
Wiechmann, A., Garcia, V., Elton, L., Williams, P., & Atkinson, S. (2023). Reciprocal regulation of NagC and quorum sensing systems and their roles in hmsHFRS expression and biofilm formation in Yersinia pseudotuberculosis. Microbiology, 169(10), Article 001397. https://doi.org/10.1099/mic.0.001397

Biofilm formation by Yersinia pseudotuberculosis is regulated by quorum sensing (QS) and dependent on the haemin storage locus hms, required for the extracellular polysaccharide poly-N-acetylglucosamine (poly-GlcNAc) production. In Escherichia coli N... Read More about Reciprocal regulation of NagC and quorum sensing systems and their roles in hmsHFRS expression and biofilm formation in Yersinia pseudotuberculosis.

The long and the short of it: Adaptation of carbon uptake and metabolic flux to different daylengths (2023)
Journal Article
Burgess, A. J., & Degen, G. E. (2024). The long and the short of it: Adaptation of carbon uptake and metabolic flux to different daylengths. Plant Physiology, 194(1), 317–318. https://doi.org/10.1093/plphys/kiad523

Challenges facing sustainable protein production: Opportunities for cereals (2023)
Journal Article
Safdar, L. B., Foulkes, M. J., Kleiner, F. H., Searle, I. R., Bhosale, R. A., Fisk, I. D., & Boden, S. A. (2023). Challenges facing sustainable protein production: Opportunities for cereals. Plant Communications, 4(6), Article 100716. https://doi.org/10.1016/j.xplc.2023.100716

Rising demands for protein worldwide are likely to drive increases in livestock production, as meat provides ∼40% of dietary protein. This will come at a significant environmental cost, and a shift toward plant-based protein sources would therefore p... Read More about Challenges facing sustainable protein production: Opportunities for cereals.

Reviving grain quality in wheat through non-destructive phenotyping techniques like hyperspectral imaging (2023)
Journal Article
Safdar, L. B., Dugina, K., Saeidan, A., Yoshicawa, G. V., Caporaso, N., Gapare, B., …Fisk, I. D. (2023). Reviving grain quality in wheat through non-destructive phenotyping techniques like hyperspectral imaging. Food and Energy Security, 12(5), Article e498. https://doi.org/10.1002/fes3.498

A long-term goal of breeders and researchers is to develop crop varieties that can resist environmental stressors and produce high yields. However, prioritising yield often compromises improvement of other key traits, including grain quality, which i... Read More about Reviving grain quality in wheat through non-destructive phenotyping techniques like hyperspectral imaging.

Molecular characterisation of defence of Brassica napus (Oilseed rape) to Rhizoctonia solani AG2-1 confirmed by functional analysis in Arabidopsis thaliana (2023)
Journal Article
Sims, I., Jayaweera, D., Swarup, K., & Ray, R. V. (2023). Molecular characterisation of defence of Brassica napus (Oilseed rape) to Rhizoctonia solani AG2-1 confirmed by functional analysis in Arabidopsis thaliana. Phytopathology, 113(8), 1525-1536. https://doi.org/10.1094/PHYTO-08-22-0305-R

Rhizoctonia solani is a necrotrophic, soilborne fungal pathogen associated with significant establishment losses in Brassica napus (oilseed rape; OSR). The anastomosis group (AG) 2-1 of R. solani is the most virulent to OSR, causing damping-off, root... Read More about Molecular characterisation of defence of Brassica napus (Oilseed rape) to Rhizoctonia solani AG2-1 confirmed by functional analysis in Arabidopsis thaliana.

Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype (2023)
Journal Article
Mawodza, T., Zhou, H., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Riche, A. B., …Mooney, S. J. (2023). Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype. Rhizosphere, 27, Article 100770. https://doi.org/10.1016/j.rhisph.2023.100770

Despite extensive research over the last century concerning the application of nitrogen fertilizer to support the production of wheat (Triticum aestivum L.), our understanding on how this impacts on root growth in subsoils is limited. In this study,... Read More about Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype.

Combined genomics to discover genes associated with tolerance to soil carbonate (2023)
Journal Article
Busoms, S., Pérez‐Martín, L., Terés, J., Huang, X., Yant, L., Tolrà, R., …Poschenrieder, C. (2023). Combined genomics to discover genes associated with tolerance to soil carbonate. Plant, Cell and Environment, 46(12), 3986-3998. https://doi.org/10.1111/pce.14691

Carbonate‐rich soils limit plant performance and crop production. Previously, local adaptation to carbonated soils was detected in wild Arabidopsis thaliana accessions, allowing the selection of two demes with contrasting phenotypes: A1 (carbonate to... Read More about Combined genomics to discover genes associated with tolerance to soil carbonate.

ERFVII action and modulation through oxygen-sensing in Arabidopsis thaliana (2023)
Journal Article
Zubrycka, A., Dambire, C., Dalle Carbonare, L., Sharma, G., Boeckx, T., Swarup, K., …Holdsworth, M. J. (2023). ERFVII action and modulation through oxygen-sensing in Arabidopsis thaliana. Nature Communications, 14, Article 4665. https://doi.org/10.1038/s41467-023-40366-y

Oxygen is a key signalling component of plant biology, and whilst an oxygen-sensing mechanism was previously described in Arabidopsis thaliana, key features of the associated PLANT CYSTEINE OXIDASE (PCO) N-degron pathway and Group VII ETHYLENE RESPON... Read More about ERFVII action and modulation through oxygen-sensing in Arabidopsis thaliana.