Time-efficient and flexible design of optimized multishell HARDI diffusion

Hutter, Jana; Tournier, J. Donald; Price, Anthony N.; Cordero-Grande, Lucilio; Hughes, Emer J.; Malik, Shaihan; Steinweg, Johannes; Bastiani, Matteo; Sotiropoulos, Stamatios N.; Jbabdi, Saad; Andersson, Jesper; Edwards, A. David; Hajnal, Joseph V.

Abstract

Purpose: Advanced diffusion magnetic resonance imaging benefits from collecting as much data as is feasible but is highly sensitive to subject motion and the risk of data loss increases with longer acquisition times. Our purpose was to create a maximally time-efficient and flexible diffusion acquisition capability with built-in robustness to partially acquired or interrupted scans. Our framework has been developed for the developing Human Connectome Project, but different application domains are equally possible.
Methods: Complete flexibility in the sampling of diffusion space combined with free choice of phase-encode-direction and the temporal ordering of the sampling scheme was developed taking into account motion robustness, internal consistency, and hardware limits. A split-diffusion-gradient preparation, multiband acceleration, and a restart capacity were added.
Results: The framework was used to explore different parameters choices for the desired high angular resolution diffusion imaging diffusion sampling. For the developing Human Connectome Project, a high-angular resolution, maximally time-efficient (20 min) multishell protocol with 300 diffusion-weighted volumes was acquired in >400 neonates. An optimal design of a high-resolution (1.2 × 1.2 mm2) two-shell acquisition with 54 diffusion weighted volumes was obtained using a split-gradient design.
Conclusion: The presented framework provides flexibility to generate time-efficient and motion-robust diffusion magnetic resonance imaging acquisitions taking into account hardware constraints that might otherwise result in sub-optimal choices. Magn Reson Med, 2017. © 2017 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

Citation

Hutter, J., Tournier, J. D., Price, A. N., Cordero-Grande, L., Hughes, E. J., Malik, S., Steinweg, J., Bastiani, M., Sotiropoulos, S. N., Jbabdi, S., Andersson, J., Edwards, A. D., & Hajnal, J. V. (2018). Time-efficient and flexible design of optimized multishell HARDI diffusion. Magnetic Resonance in Medicine, 79(3), 1276-1292. https://doi.org/10.1002/mrm.26765

• Journal Article Type: Article
• Acceptance Date: May 3, 2017
• Online Publication Date: May 30, 2017
• Publication Date: 2018-03
• Deposit Date: Jun 2, 2017
• Publicly Available Date: Sep 26, 2018
• Journal: Magnetic Resonance in Medicine
• Print ISSN: 0740-3194
• Electronic ISSN: 1522-2594
• Publisher: Wiley
• Peer Reviewed: Peer Reviewed
• Volume: 79
• Issue: 3
• Pages: 1276-1292
• DOI: https://doi.org/10.1002/mrm.26765
• Public URL: https://nottingham-repository.worktribe.com/output/862424
• Publisher URL: http://onlinelibrary.wiley.com/doi/10.1002/mrm.26765/full
• Contract Date: Jun 2, 2017