All Outputs (12)

Evaluation of methods and marker systems in genomic selection of oil palm (Elaeis guineensis Jacq.) (2017)
Journal Article
Kwong, Q. B., Teh, C. K., Ong, A. L., Chew, F. T., Mayes, S., Kulaveerasingam, H., …Harikrishna, J. A. (2017). Evaluation of methods and marker systems in genomic selection of oil palm (Elaeis guineensis Jacq.). BMC Genetics, 18(1), https://doi.org/10.1186/s12863-017-0576-5

Background Genomic selection (GS) uses genome-wide markers as an attempt to accelerate genetic gain in breeding programs of both animals and plants. This approach is particularly useful for perennial crops such as oil palm, which have long breedin... Read More about Evaluation of methods and marker systems in genomic selection of oil palm (Elaeis guineensis Jacq.).

High density SNP and DArT-based genetic linkage maps of two closely related oil palm populations (2017)
Journal Article
Gan, S. T., Wong, W. C., Wong, C. K., Soh, A. C., Kilian, A., Low, E. L., …Mayes, S. (in press). High density SNP and DArT-based genetic linkage maps of two closely related oil palm populations. Journal of Applied Genetics, https://doi.org/10.1007/s13353-017-0420-7

Oil palm (Elaeis guineensis Jacq.) is an outbreeding perennial tree crop with long breeding cycles, typically 12 years. Molecular marker technologies can greatly improve the breeding efficiency of oil palm. This study reports the first use of the DAr... Read More about High density SNP and DArT-based genetic linkage maps of two closely related oil palm populations.

Microsatellite analysis of populations of the endangered tree Gomortega keule suggests pre-Columbian differentiation (2017)
Journal Article
Munoz-Concha, D., Davey, M. R., Ribas, G., & Mayes, S. (in press). Microsatellite analysis of populations of the endangered tree Gomortega keule suggests pre-Columbian differentiation. New Zealand Journal of Botany, 55(3), https://doi.org/10.1080/0028825X.2017.1343737

Temperate forests have been affected extensively by human activities, resulting in land cover changes and population fragmentation. However, these anthropogenic effects can be superimposed onto the natural history of species, making it difficult to d... Read More about Microsatellite analysis of populations of the endangered tree Gomortega keule suggests pre-Columbian differentiation.

Differential gene expression at different stages of mesocarp development in high- and low-yielding oil palm (2017)
Journal Article
Wong, Y. C., Teh, H. F., Mebus, K., Ooi, T. E. K., Kwong, Q. B., Koo, K. L., …Kulaveerasingam, H. (2017). Differential gene expression at different stages of mesocarp development in high- and low-yielding oil palm. BMC Genomics, 18(1), Article 470. https://doi.org/10.1186/s12864-017-3855-7

Background The oil yield trait of oil palm is expected to involve multiple genes, environmental influences and interactions. Many of the underlying mechanisms that contribute to oil yield are still poorly understood. In this study, we used a micro... Read More about Differential gene expression at different stages of mesocarp development in high- and low-yielding oil palm.

Characterizing haploinsufficiency of SHELL gene to improve fruit form prediction in introgressive hybrids of oil palm (2017)
Journal Article
Teh, C. K., Muaz, S. D., Tangaya, P., Fong, P., Ong, A. L., Mayes, S., …Appleton, D. R. (in press). Characterizing haploinsufficiency of SHELL gene to improve fruit form prediction in introgressive hybrids of oil palm. Scientific Reports, 7(1), https://doi.org/10.1038/s41598-017-03225-7

The fundamental trait in selective breeding of oil palm (Eleais guineensis Jacq.) is the shell thickness surrounding the kernel. The monogenic shell thickness is inversely correlated to mesocarp thickness, where the crude palm oil accumulates. Commer... Read More about Characterizing haploinsufficiency of SHELL gene to improve fruit form prediction in introgressive hybrids of oil palm.

Genomic selection in commercial perennial crops: applicability and improvement in oil palm (Elaeis guineensis Jacq.) (2017)
Journal Article
Kwong, Q. B., Ong, A. L., Teh, C. K., Chew, F. T., Tammi, M., Mayes, S., …Appleton, D. R. (in press). Genomic selection in commercial perennial crops: applicability and improvement in oil palm (Elaeis guineensis Jacq.). Scientific Reports, 7, Article 2872. https://doi.org/10.1038/s41598-017-02602-6

Genomic selection (GS) uses genome-wide markers to select individuals with the desired overall combination of breeding traits. A total of 1,218 individuals from a commercial population of Ulu Remis x AVROS (UR x AVROS) were genotyped using the OP20... Read More about Genomic selection in commercial perennial crops: applicability and improvement in oil palm (Elaeis guineensis Jacq.).

A transcriptomic comparison of two Bambara groundnut landraces under dehydration stress (2017)
Journal Article
Khan, F., Chai, H. H., Ajmera, I., Hodgman, C., Mayes, S., & Lu, C. (2017). A transcriptomic comparison of two Bambara groundnut landraces under dehydration stress. Genes, 8(4), Article 121. https://doi.org/10.3390/genes8040121

The ability to grow crops under low-water conditions is a significant advantage in relation to global food security. Bambara groundnut is an underutilised crop grown by subsistence farmers in Africa and is known to survive in regions of water deficit... Read More about A transcriptomic comparison of two Bambara groundnut landraces under dehydration stress.

Development of gene?based SSR markers in winged bean (Psophocarpus tetragonolobus (L.) DC.) for diversity assessment (2017)
Journal Article
Wong, Q., Tanzi, A., Ho, W., Malla, S., Blythe, M., Karunaratne, A., …Mayes, S. (2017). Development of gene‐based SSR markers in winged bean (Psophocarpus tetragonolobus (L.) DC.) for diversity assessment. Genes, 8(3), Article 100. https://doi.org/10.3390/genes8030100

Winged bean (Psophocarpus tetragonolobus) is an herbaceous multipurpose legume grown in hot and humid countries as a pulse, vegetable (leaves and pods), or root tuber crop depending on local consumption preferences. In addition to its different nutri... Read More about Development of gene?based SSR markers in winged bean (Psophocarpus tetragonolobus (L.) DC.) for diversity assessment.

A cross-species gene expression marker-based genetic map and QTL analysis in bambara groundnut (2017)
Journal Article
Chai, H., Ho, W., Graham, N., May, S., Massawe, F., & Mayes, S. (2017). A cross-species gene expression marker-based genetic map and QTL analysis in bambara groundnut. Genes, 8(3), https://doi.org/10.3390/genes8020084

Bambara groundnut (Vigna subterranea (L.) Verdc.) is an underutilised legume crop, which has long been recognised as a protein-rich and drought-tolerant crop, used extensively in Sub-Saharan Africa. The aim of the study was to identify quantitative t... Read More about A cross-species gene expression marker-based genetic map and QTL analysis in bambara groundnut.

Integrating genetic maps in bambara groundnut [Vigna subterranea (L) Verdc.] and their syntenic relationships among closely related legumes (2017)
Journal Article
Ho, W. K., Chai, H. H., Kendabie, P., Ahmad, N. S., Jani, J., Massawe, F., …Mayes, S. (2017). Integrating genetic maps in bambara groundnut [Vigna subterranea (L) Verdc.] and their syntenic relationships among closely related legumes. BMC Genomics, 18, Article 192. https://doi.org/10.1186/s12864-016-3393-8

Background Bambara groundnut [Vigna subterranea (L) Verdc.] is an indigenous legume crop grown mainly in subsistence and small-scale agriculture in sub-Saharan Africa for its nutritious seeds and its tolerance to drought and poor soils. Given that... Read More about Integrating genetic maps in bambara groundnut [Vigna subterranea (L) Verdc.] and their syntenic relationships among closely related legumes.

Identifying seedling root architectural traits associated with yield and yield components in wheat (2017)
Journal Article
Xie, Q., Fernando, K., Mayes, S., & Sparkes, D. L. (in press). Identifying seedling root architectural traits associated with yield and yield components in wheat. Annals of Botany, 119(7), https://doi.org/10.1093/aob/mcx001

Background and Aims: Plant roots growing underground are critical for soil resource acquisition, anchorage and plant-environment interactions. In wheat (Triticum aestivum), however, the target root traits to improve yield potential still remain large... Read More about Identifying seedling root architectural traits associated with yield and yield components in wheat.

Image-based 3D canopy reconstruction to determine potential productivity in complex multi-species crop systems (2017)
Journal Article
Burgess, A. J., Retkute, R., Pound, M. P., Mayes, S., & Murchie, E. H. (2017). Image-based 3D canopy reconstruction to determine potential productivity in complex multi-species crop systems. Annals of Botany, 119(4), 517-532. https://doi.org/10.1093/aob/mcw242

Background and Aims: Intercropping systems contain two or more species simultaneously in close proximity. Due to contrasting features of the component crops, quantification of the light environment and photosynthetic productivity is extremely difficu... Read More about Image-based 3D canopy reconstruction to determine potential productivity in complex multi-species crop systems.