Accounting for variability in ion current recordings using a mathematical model of artefacts in voltage-clamp experiments
(2020)
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Lei, C. L., Clerx, M., Whittaker, D. G., Gavaghan, D. J., de Boer, T. P., & Mirams, G. R. Accounting for variability in ion current recordings using a mathematical model of artefacts in voltage-clamp experiments
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Nuclear poly(A) tail size is regulated by Cnot1 during the serum response (2019)
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Singhania, R., Thorn, G. J., Williams, K., Gandhi, R. D., Daher, C., Barthet-Barateig, A., …de Moor, C. H. (2019). Nuclear poly(A) tail size is regulated by Cnot1 during the serum responseThe poly(A) tail removal from mRNAs introduces a delay between mRNA synthesis and decay. We measured levels and poly(A) tail sizes of serum-induced mRNAs and used mathematical modelling to compare their deadenylation time with the delay in decay and... Read More about Nuclear poly(A) tail size is regulated by Cnot1 during the serum response.
Gsmodutils: A python based framework for test-driven genome scale metabolic model development (2018)
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Gilbert, J. P., Pearcy, N., Norman, R., Millat, T., Winzer, K., King, J., …Twycross, J. (2018). Gsmodutils: A python based framework for test-driven genome scale metabolic model developmentMotivation Genome scale metabolic models (GSMMs) are increasingly important for systems biology and metabolic engineering research as they are capable of simulating complex steady-state behaviour. Constraints based models of this form can include tho... Read More about Gsmodutils: A python based framework for test-driven genome scale metabolic model development.
Gaussian process emulation for discontinuous response surfaces with applications for cardiac electrophysiology models (2018)
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Ghosh, S., J. Gavaghan, D., & R. Mirams, G. Gaussian process emulation for discontinuous response surfaces with applications for cardiac electrophysiology modelsMathematical models of biological systems are beginning to be used for safety-critical applications, where large numbers of repeated model evaluations are required to perform uncertainty quantification and sensitivity analysis. Most of these models a... Read More about Gaussian process emulation for discontinuous response surfaces with applications for cardiac electrophysiology models.
Modeling and measurement of unsteady Vulcanian plumes at Santiaguito Volcano, Guatemala (2015)
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Phillips, J., Scase, M., & Watson, I. (2015). Modeling and measurement of unsteady Vulcanian plumes at Santiaguito Volcano, Guatemala
Gray categories with duals and their diagrams (2012)
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Barrett, J., Meusburger, C., & Schaumann, G. Gray categories with duals and their diagramsThe geometric and algebraic properties of Gray categories with duals are investigated by means of a diagrammatic calculus. The diagrams are three-dimensional stratifications of a cube, with regions, surfaces, lines and vertices labelled by Gray categ... Read More about Gray categories with duals and their diagrams.