All Outputs (9)

Improved CRISPR/Cas9 Tools for the Rapid Metabolic Engineering of Clostridium acetobutylicum (2021)
Journal Article
Wilding-Steele, T., Ramette, Q., Jacottin, P., & Soucaille, P. (2021). Improved CRISPR/Cas9 Tools for the Rapid Metabolic Engineering of Clostridium acetobutylicum. International Journal of Molecular Sciences, 22(7), 1-11. https://doi.org/10.3390/ijms22073704

Clustered regularly interspaced short palindromic repeats (CRISPR)/Cas (CRISPR-associated proteins)9 tools have revolutionized biology—several highly efficient tools have been constructed that have resulted in the ability to quickly engineer model ba... Read More about Improved CRISPR/Cas9 Tools for the Rapid Metabolic Engineering of Clostridium acetobutylicum.

Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth conditions (2021)
Journal Article
Tomi-Andrino, C., Norman, R., Millat, T., Soucaille, P., Winzer, K., Barrett, D. A., …Kim, D. (2021). Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth conditions. PLoS Computational Biology, 17(1), Article e1007694. https://doi.org/10.1371/journal.pcbi.1007694

© 2021 Tomi-Andrino et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source a... Read More about Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth conditions.

Synthetic biology on acetogenic bacteria for highly efficient conversion of c1 gases to biochemicals (2020)
Journal Article
Jin, S., Bae, J., Song, Y., Pearcy, N., Shin, J., Kang, S., …Cho, B. K. (2020). Synthetic biology on acetogenic bacteria for highly efficient conversion of c1 gases to biochemicals. International Journal of Molecular Sciences, 21(20), Article 7639. https://doi.org/10.3390/ijms21207639

© 2020 by the authors. Licensee MDPI, Basel, Switzerland. Synthesis gas, which is mainly produced from fossil fuels or biomass gasification, consists of C1 gases such as carbon monoxide, carbon dioxide, and methane as well as hydrogen. Acetogenic bac... Read More about Synthetic biology on acetogenic bacteria for highly efficient conversion of c1 gases to biochemicals.

Assessing the impact of physicochemical parameters in the predictive capabilities of thermodynamics-based stoichiometric approaches under mesophilic and thermophilic conditions (2020)
Working Paper
Tomi-Andrino, C., Norman, R., Millat, T., Soucaille, P., Winzer, K., Barrett, D. A., …Kim, D. Assessing the impact of physicochemical parameters in the predictive capabilities of thermodynamics-based stoichiometric approaches under mesophilic and thermophilic conditions

Metabolic engineering in the post-genomic era is characterised by the development of new methods for metabolomics and fluxomics, supported by the integration of genetic engineering tools and mathematical modelling. Particularly, constraint-based stoi... Read More about Assessing the impact of physicochemical parameters in the predictive capabilities of thermodynamics-based stoichiometric approaches under mesophilic and thermophilic conditions.

Reviving the Weizmann process for commercial n-butanol production (2018)
Journal Article
Nguyen, N. P. T., Raynaud, C., Meynial-Salles, I., & Soucaille, P. (2018). Reviving the Weizmann process for commercial n-butanol production. Nature Communications, 9, Article 3682. https://doi.org/10.1038/s41467-018-05661-z

© 2018, The Author(s). Developing a commercial process for the biological production of n-butanol is challenging as it needs to combine high titer, yield, and productivities. Here we engineer Clostridium acetobutylicum to stably and continuously prod... Read More about Reviving the Weizmann process for commercial n-butanol production.

Photoinhibition of FeFe hydrogenase (2017)
Journal Article
Sensi, M., Baffert, C., Fradale, L., Gauquelin, C., Soucaille, P., Meynial-Salles, I., …Bertini, L. (2017). Photoinhibition of FeFe hydrogenase. ACS Catalysis, 7(10), 7378-7387. https://doi.org/10.1021/acscatal.7b02252

© 2017 American Chemical Society. In the enzyme FeFe hydrogenase, hydrogen oxidation and production occur at the H-cluster, a Fe6S6 active site that bears intrinsic carbonyl and cyanide ligands. This enzyme has been coupled to photosensitizers to des... Read More about Photoinhibition of FeFe hydrogenase.

Mechanism of O2 diffusion and reduction in FeFe hydrogenases (2016)
Journal Article
Kubas, A., Orain, C., De Sancho, D., Saujet, L., Sensi, M., Gauquelin, C., …Léger, C. (2017). Mechanism of O2 diffusion and reduction in FeFe hydrogenases. Nature Chemistry, 9(1), 88-95. https://doi.org/10.1038/nchem.2592

© 2016 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. FeFe hydrogenases are the most efficient H2-producing enzymes. However, inactivation by O2 remains an obstacle that prevents them being used in many biotechnological d... Read More about Mechanism of O2 diffusion and reduction in FeFe hydrogenases.

Electrochemical Measurements of the Kinetics of Inhibition of Two FeFe Hydrogenases by O2 Demonstrate That the Reaction Is Partly Reversible (2015)
Journal Article
Orain, C., Saujet, L., Gauquelin, C., Soucaille, P., Meynial-Salles, I., Baffert, C., …Léger, C. (2015). Electrochemical Measurements of the Kinetics of Inhibition of Two FeFe Hydrogenases by O2 Demonstrate That the Reaction Is Partly Reversible. Journal of the American Chemical Society, 137(39), 12580-12587. https://doi.org/10.1021/jacs.5b06934

© 2015 American Chemical Society. The mechanism of reaction of FeFe hydrogenases with oxygen has been debated. It is complex, apparently very dependent on the details of the protein structure, and difficult to study using conventional kinetic techniq... Read More about Electrochemical Measurements of the Kinetics of Inhibition of Two FeFe Hydrogenases by O2 Demonstrate That the Reaction Is Partly Reversible.

The oxidative inactivation of FeFe hydrogenase reveals the flexibility of the H-cluster (2014)
Journal Article
Fourmond, V., Greco, C., Sybirna, K., Baffert, C., Wang, P. H., Ezanno, P., …Léger, C. (2014). The oxidative inactivation of FeFe hydrogenase reveals the flexibility of the H-cluster. Nature Chemistry, 6(4), 336-342. https://doi.org/10.1038/nchem.1892

Nature is a valuable source of inspiration in the design of catalysts, and various approaches are used to elucidate the mechanism of hydrogenases, the enzymes that oxidize or produce H 2. In FeFe hydrogenases, H 2 oxidation occurs at the H-cluster, a... Read More about The oxidative inactivation of FeFe hydrogenase reveals the flexibility of the H-cluster.