Theocharis Tsoleridis
Discovery of novel alphacoronaviruses in European rodents and shrews
Tsoleridis, Theocharis; Onianwa, Okechukwu; Horncastle, Emma; Dayman, Emma; Zhu, Miaoran; Danjittrong, Taechasit; Wachtl, Marta; Behnke, Jerzy M.; Chapman, Sarah; Strong, Victoria; Dodds, Phillipa; Tarlinton, Rachael E.; Ball, Jonathan K.; McClure, Patrick
Authors
Okechukwu Onianwa
Emma Horncastle
Emma Dayman
Miaoran Zhu
Taechasit Danjittrong
Marta Wachtl
Jerzy M. Behnke
Sarah Chapman
Victoria Strong
Phillipa Dodds
Professor RACHAEL TARLINTON rachael.tarlinton@nottingham.ac.uk
Associate Professor
JONATHAN BALL jonathan.ball@nottingham.ac.uk
Professor of Molecular Virology
PATRICK MCCLURE PATRICK.MCCLURE@NOTTINGHAM.AC.UK
Assistant Professor
Abstract
Eight hundred and thirteen European rodents and shrews encompassing seven different species were screened for alphacoronaviruses using PCR detection. Novel alphacoronaviruses were detected in the species Rattus norvegicus, Microtus agrestis, Sorex araneus and Myodes glareolus. These, together with the recently described Lucheng virus found in China, form a distinct rodent/shrew-specific clade within the coronavirus phylogeny. Across a highly conserved region of the viral polymerase gene, the new members of this clade were up to 22% dissimilar at the nucleotide level to the previously described Lucheng virus. As such they might represent distinct species of alphacoronaviruses. These data greatly extend our knowledge of wildlife reservoirs of alphacoronaviruses.
Citation
Tsoleridis, T., Onianwa, O., Horncastle, E., Dayman, E., Zhu, M., Danjittrong, T., …McClure, P. (2016). Discovery of novel alphacoronaviruses in European rodents and shrews. Viruses, 8(3), Article 84. https://doi.org/10.3390/v8030084
Journal Article Type | Article |
---|---|
Publication Date | Mar 18, 2016 |
Deposit Date | Mar 21, 2016 |
Publicly Available Date | Dec 3, 2018 |
Journal | Viruses |
Electronic ISSN | 1999-4915 |
Publisher | MDPI |
Peer Reviewed | Peer Reviewed |
Volume | 8 |
Issue | 3 |
Article Number | 84 |
DOI | https://doi.org/10.3390/v8030084 |
Keywords | coronaviruses, rodents, shrews, alphacoronavirus |
Public URL | https://nottingham-repository.worktribe.com/output/779899 |
Publisher URL | http://www.mdpi.com/1999-4915/8/3/84 |
Files
Viruses Free Full-Text Discovery of Novel Alphacoronaviruses in European Rodents and Shrews HTML
(120 Kb)
Other
Publisher Licence URL
https://creativecommons.org/licenses/by/3.0/
You might also like
Downloadable Citations
About Repository@Nottingham
Administrator e-mail: digital-library-support@nottingham.ac.uk
This application uses the following open-source libraries:
SheetJS Community Edition
Apache License Version 2.0 (http://www.apache.org/licenses/)
PDF.js
Apache License Version 2.0 (http://www.apache.org/licenses/)
Font Awesome
SIL OFL 1.1 (http://scripts.sil.org/OFL)
MIT License (http://opensource.org/licenses/mit-license.html)
CC BY 3.0 ( http://creativecommons.org/licenses/by/3.0/)
Powered by Worktribe © 2024
Advanced Search